SRR6575892_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575892_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	293258
Sequences flagged as poor quality	0
Sequence length	100
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	708	0.24142563885725196	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	498	0.16981633919620265	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	474	0.1616324192349399	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	439	0.14969753595809832	No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG	401	0.1367396626860989	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	358	0.12207680608883646	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	338	0.11525687278778414	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	303	0.10332198951094257	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GATATAC	25	0.0052366345	56.38783	3
GTATCAA	930	0.0	49.61771	1
CAACGCA	1170	0.0	38.55578	5
ATCAACG	1165	0.0	38.31791	3
TCAACGC	1170	0.0	38.154156	4
AACGCAG	1205	0.0	37.82586	6
TATCAAC	1370	0.0	32.589764	2
ACGCAGA	1445	0.0	31.86855	7
CGCAGAG	1475	0.0	31.247017	8
TACATGG	1745	0.0	30.70348	2
GGTATCA	480	0.0	30.409832	1
GTACATG	1780	0.0	29.891796	1
ACATGGG	1795	0.0	29.319576	3
CCTAATG	65	0.0061481586	28.921764	2
GCAGAGT	1645	0.0	28.017841	9
GTAATAC	70	0.008834783	26.851345	3
GGGTACC	320	0.0	26.431795	7
ATTAACG	45	9.5146184E-4	26.109926	40-41
CTACGTG	45	9.5146184E-4	26.109926	76-77
TCTATAC	90	9.512702E-4	26.105474	3