SRR6575897_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575897_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1010051
Sequences flagged as poor quality	0
Sequence length	100
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	2708	0.2681052738921104	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	2463	0.24384907296760264	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	2188	0.21662272499111432	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	2154	0.21325655833220303	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	1973	0.19533667111858707	No Hit
GCCTAGTACTGTGCGCCAATTAGGTCGTCATTGCGCCAGCTCGTCAGCGC	1472	0.14573521535051198	No Hit
GTACTAGGCATCGTCATCCAATGCGACGAGTCCTACACTATCTTGGATAT	1116	0.11048947033367622	No Hit
GTATACGGGCGTCGGCATCCAGACCGTCGGCTGATCGTGGTTTTACTAGG	1050	0.10395514681931903	No Hit
GTATAAAATCAGGCAGTTTTTGATCACGTTTATTGTAAGCCGTCAGCATC	1037	0.10266808309679412	No Hit
GTTTGGGACTGACCCTAGTCTGTGTCCATGCAGAAGAAGCTAGTTCTACG	1024	0.10138101937426922	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCTAACG	265	0.0	35.48474	2
TAGGTAT	515	0.0	34.680344	5
AGGTATA	525	0.0	33.122868	6
CTTAGGT	560	0.0	32.73283	3
CTAACGC	290	0.0	32.41448	3
AAGGGTA	355	0.0	31.775318	5
AACCGTG	225	0.0	29.243612	7
CGCCTAC	325	0.0	28.922253	7
ACCTAAG	945	0.0	28.85717	1
TTAGGTA	605	0.0	28.744408	4
TAAGGGT	150	3.6961865E-8	28.200594	4
GTGCAAG	420	0.0	27.986477	1
ACGCCTA	340	0.0	27.646275	6
GTCTAAC	360	0.0	27.42675	1
TGAACCG	240	0.0	27.417246	5
CTAAGAC	1175	0.0	26.800562	3
CATGGGG	3320	0.0	26.756588	4
GTACATG	7185	0.0	26.633312	1
TAAGACA	1315	0.0	26.449226	4
TACATGG	7305	0.0	26.260166	2