SRR6575903_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575903_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	584049
Sequences flagged as poor quality	0
Sequence length	100
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1164	0.19929834654284143	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	859	0.14707670075627216	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	739	0.12653047946319573	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	682	0.11677102434898441	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	672	0.11505883924122805	No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG	651	0.11146325051493966	No Hit
CCTATAAGCAGTTCTTGTATTTTTATTCACACAGGTCTGATTAAGATGAA	633	0.10838131732097821	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	615	0.10529938412701674	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	1350	0.0	57.23874	1
ATCAACG	1995	0.0	37.92678	3
TCAACGC	2025	0.0	37.596985	4
CAACGCA	2085	0.0	36.51506	5
AACGCAG	2120	0.0	35.912216	6
GTACATG	3460	0.0	34.588966	1
ACATGGG	3520	0.0	34.17908	3
TACATGG	3520	0.0	33.778545	2
CATGGGG	1380	0.0	33.714687	4
GGTATCA	565	0.0	31.68948	1
GTACTAG	105	2.0233329E-6	31.411503	1
CCTATAA	405	0.0	31.411503	1
TAGTGCG	60	0.0041609523	31.330824	5
TATCAAC	2435	0.0	31.266487	2
ACGCAGA	2405	0.0	31.070272	7
CTATAAG	380	0.0	29.68183	2
CGCAGAG	2495	0.0	29.57278	8
GTAATAC	100	5.3220163E-5	28.19774	3
TATAAGC	385	0.0	28.07567	3
TATATAC	155	5.0784365E-8	27.288136	3