SRR6575908_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575908_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1480528
Sequences flagged as poor quality	0
Sequence length	100
%GC	51

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA	1933	0.13056152940032204	No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT	1909	0.12894048609685194	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1861	0.1256983994899117	No Hit
TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT	1823	0.12313174759275071	No Hit
ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG	1707	0.11529670495931182	No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC	1689	0.11408092248170923	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	1635	0.11043357504890149	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA	1529	0.1032739671252418	No Hit
GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT	1490	0.10063977175710287	No Hit
GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA	1488	0.10050468481514704	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	2280	54.75151	1
TCAACGC	2945	42.293766	4
ATCAACG	2960	42.23966	3
CAACGCA	3060	41.3187	5
GGTATCA	830	40.296314	1
AACGCAG	3215	39.32666	6
ACGCAGA	3980	31.882507	7
TATCAAC	4045	31.258219	2
GTACATG	5770	29.390823	1
GTCTTAG	715	28.9889	1
CGCAGAG	4385	28.938807	8
TACATGG	5740	28.906351	2
TAGGTAT	450	28.201166	5
ACATGGG	5975	27.926785	3
CTTAGGT	430	27.327633	3
GCAGAGT	4830	25.978931	9
CATGGGG	3550	24.626368	4
AGGTATA	480	24.480179	6
TTAGGTA	465	24.259068	4
GGTACCT	1030	23.727531	8