SRR6575911_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575911_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1662126
Sequences flagged as poor quality	0
Sequence length	100
%GC	51

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	2571	0.15468141404442262	No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT	2272	0.13669240478760336	No Hit
GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA	2240	0.13476715964974978	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA	2213	0.13314273406468582	No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC	2172	0.13067601373181095	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	2164	0.13019470244734754	No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA	2078	0.12502060613936608	No Hit
GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT	2003	0.1205083128475218	No Hit
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	1844	0.11094225106881186	No Hit
TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT	1787	0.1075129081670102	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	1786	0.10745274425645228	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	2740	51.13044	1
GGTATCA	1180	43.82526	1
TCAACGC	3505	38.741405	4
ATCAACG	3570	38.29925	3
CAACGCA	3610	37.74473	5
AACGCAG	3765	36.315624	6
ACGCAGA	4505	30.14176	7
TATCAAC	4840	28.55721	2
CGCAGAG	4905	27.683716	8
GTACATG	6575	27.599764	1
TACATGG	6680	26.954802	2
ACATGGG	6815	25.785244	3
TAGGTAT	520	25.29998	5
GCAGAGT	5460	24.955765	9
CTTAGGT	565	24.948149	3
ACCTAAG	690	24.528286	1
AGGTATA	530	23.936102	6
TTAGGTA	610	23.10771	4
CTAAGAC	970	22.766256	3
GTCTTAG	805	22.19226	1