SRR6575913_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575913_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1488517
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	2242	0.1506197107590978	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	2097	0.14087847166004822	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	2022	0.13583989971226396	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	2012	0.13516809011922604	No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT	1892	0.1271063750027712	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA	1836	0.12334424128175896	No Hit
GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA	1752	0.11770104070024058	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	1747	0.1173651359037216	No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC	1743	0.11709641206650645	No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA	1571	0.10554128706625453	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	2620	0.0	50.23513	1
TCAACGC	3220	0.0	39.83662	4
ATCAACG	3305	0.0	38.812077	3
CAACGCA	3325	0.0	38.57862	5
AACGCAG	3400	0.0	37.865818	6
CTTAGGT	615	0.0	37.436623	3
GTCTTAG	845	0.0	37.270817	1
TAGGTAT	645	0.0	36.42386	5
GGTATCA	1065	0.0	35.750835	1
AGGTATA	640	0.0	35.240086	6
TTAGGTA	645	0.0	34.966904	4
TTACGGT	60	0.0041671046	31.324522	4
GGTATAG	765	0.0	30.710316	7
TATCAAC	4335	0.0	30.252825	2
TCTTAGG	995	0.0	29.29	2
ACGCAGA	4410	0.0	29.087055	7
GTACATG	6400	0.0	28.864456	1
TACATGG	6445	0.0	28.079453	2
CGCAGAG	4680	0.0	27.509356	8
ACATGGG	6565	0.0	27.197224	3