SRR6575913_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575913_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1488517
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	2410	0.16190611192213458	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	2040	0.13704915697973216	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	2024	0.13597426163087153	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1913	0.1285171751481508	No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT	1777	0.11938056468283532	No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC	1753	0.11776822165954436	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA	1697	0.1140060879385321	No Hit
TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT	1544	0.1037274011650522	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	1525	0.10245096293828018	No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA	1525	0.10245096293828018	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	2380	51.227253	1
TCAACGC	3000	39.78745	4
GGTATCA	975	39.590187	1
ATCAACG	3040	39.109344	3
CAACGCA	3050	38.981117	5
AACGCAG	3165	37.416267	6
TATCAAC	3910	31.01028	2
GTCTTAG	995	30.278557	1
TTAGGTA	765	29.485834	4
GTACATG	5860	29.481306	1
AGGTATA	720	29.370655	6
TAGGTAT	720	29.370655	5
CTAAGAC	1040	28.918798	3
ACGCAGA	4120	28.743319	7
ACCTAAG	810	28.476679	1
CTTAGGT	760	28.44316	3
TAAGACA	1190	28.432768	4
TACATGG	6020	28.260176	2
ACATGGG	6115	27.435024	3
CGCAGAG	4415	27.053814	8