SRR6575917_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575917_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1683117
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	3657	0.2172754478743902	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	2946	0.17503239525237996	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	2869	0.1704575498910652	No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC	2035	0.12090662740617557	No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA	2031	0.12066897310169168	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	2012	0.11954011515539324	No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT	1993	0.11841125720909479	No Hit
TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT	1942	0.11538116482692527	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	1790	0.10635030125653773	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA	1729	0.10272607311315851	No Hit
ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG	1684	0.10005246218771481	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	2795	0.0	50.075428	1
GGTATCA	1155	0.0	41.616756	1
TCAACGC	3380	0.0	39.913242	4
CAACGCA	3455	0.0	38.910767	5
ATCAACG	3505	0.0	38.489803	3
TATAGCG	75	7.439312E-6	37.60467	5
AACGCAG	3615	0.0	37.188576	6
GTCTTAG	1200	0.0	34.950935	1
AGGTATA	975	0.0	33.747776	6
TTAGGTA	1000	0.0	33.37415	4
TAGGTAT	1005	0.0	33.208107	5
CTTAGGT	1015	0.0	32.88093	3
TATCAAC	4240	0.0	32.371944	2
GTACATG	6620	0.0	30.325058	1
ACGCAGA	4475	0.0	29.931343	7
GGTATAG	1105	0.0	29.772148	7
TACATGG	6800	0.0	29.516903	2
TCTTAGG	1370	0.0	28.821096	2
ACATGGG	6965	0.0	28.34523	3
TATAGTA	1170	0.0	28.118973	9