SRR6575925_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575925_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	285667
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	680	0.23803939551995854	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	421	0.1473743904616214	No Hit
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	417	0.14597415872326872	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	399	0.13967311590068154	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	385	0.1347723048164471	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	362	0.1267209723209191	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	319	0.11166848113362761	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	304	0.106417612114805	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	298	0.10431726450727595	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	294	0.10291703276892325	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGAACTC	65	2.774912E-6	43.390594	2
CCGAACT	90	1.2982127E-8	41.812817	1
CCCGCTA	45	0.0010128606	41.776222	3
CCGCTAA	50	0.0017001979	37.598602	4
ATTTAGG	55	0.0027024725	34.210487	1
CGCTAAA	55	0.0027141026	34.180546	5
GCCTAAA	60	0.0041387742	31.359612	1
GTACATG	1710	0.0	30.809444	1
TACATGG	1750	0.0	30.084146	2
ACATGGG	1725	0.0	29.424992	3
TCTAGGG	65	0.006147652	28.922003	3
GTATCAC	65	0.006147652	28.922003	3
TCTAGAT	180	2.3646862E-10	28.726183	2
CATGGGG	900	0.0	28.19895	4
GTATCAA	885	0.0	27.63898	1
GCAAACG	70	0.008789092	26.87967	1
TAGCACA	70	0.008826713	26.856144	4
ATCGGAT	35	0.008833973	26.856144	92-93
CTAGGCA	70	0.008826713	26.856144	4
ATACCGT	105	7.404276E-5	26.856142	6