SRR6575933_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575933_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1126646
Sequences flagged as poor quality	0
Sequence length	100
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	4278	0.3797111071268171	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	3353	0.29760900939603036	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	3051	0.27080378397473565	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1509	0.13393736808189974	No Hit
GTTTGGGACTGACCCTAGTCTGTGTCCATGCAGAAGAAGCTAGTTCTACG	1467	0.13020948904979915	No Hit
ATCCTAGGTAACATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAG	1418	0.12586029684568178	No Hit
ACCCTAGTCTGTGTCCATGCAGAAGAAGCTAGTTCTACGGGAAGGAACTT	1344	0.11929212902721885	No Hit
ATCCTATTCCCTACCAAAATGAAGATGCTGCTGCTGCTGCTGTGTTTGGG	1337	0.11867081585520207	No Hit
GAATTTATACTGGGGATGCTGTATGGATAGGAAGGGATGATGGTGGAGTC	1239	0.10997243144696736	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	1141	0.10127404703873266	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	3275	0.0	44.877987	1
ATCAACG	4315	0.0	33.873978	3
AGGTATA	880	0.0	33.646854	6
TCAACGC	4345	0.0	33.640095	4
CAACGCA	4430	0.0	33.10072	5
GTCTTAG	995	0.0	32.667515	1
AAGGGTA	305	0.0	32.359814	5
TTAGGTA	920	0.0	32.183945	4
TAGGTAT	940	0.0	31.999168	5
GTACATG	7825	0.0	31.966879	1
AACGCAG	4595	0.0	31.912119	6
CTTAGGT	915	0.0	31.846167	3
GGTATAG	930	0.0	31.331131	7
TATCAAC	4695	0.0	31.232416	2
TACATGG	8040	0.0	30.86487	2
ACATGGG	7935	0.0	30.740223	3
TCTAACG	65	0.0061548967	28.922327	2
CATGGGG	3465	0.0	28.619747	4
TCTTAGG	1165	0.0	28.23961	2
ACCTAAG	1555	0.0	27.567734	1