SRR6575934_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575934_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1021493
Sequences flagged as poor quality	0
Sequence length	100
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	3509	0.34351679355609877	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	3194	0.31267957783362194	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	2989	0.29261091363327996	No Hit
ATCCTAGGTAACATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAG	1579	0.154577662304098	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1522	0.14899759469717364	No Hit
ACCCTAGTCTGTGTCCATGCAGAAGAAGCTAGTTCTACGGGAAGGAACTT	1362	0.13333424702861402	No Hit
GAATTTATACTGGGGATGCTGTATGGATAGGAAGGGATGATGGTGGAGTC	1348	0.13196370410761504	No Hit
GTTTGGGACTGACCCTAGTCTGTGTCCATGCAGAAGAAGCTAGTTCTACG	1314	0.1286352427280461	No Hit
ATCCTATTCCCTACCAAAATGAAGATGCTGCTGCTGCTGCTGTGTTTGGG	1104	0.10807709891306157	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	1101	0.10778341114427607	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	1085	0.1062170763774201	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA	1072	0.10494442937934963	No Hit
GTGTAGCCACGATCACAAGAAAGACGTGGTCCTGACAGACAGACAATCCT	1048	0.1025949272290657	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	3560	41.588703	1
AGGTATA	855	34.071526	6
TCAACGC	4335	33.818375	4
ATCAACG	4365	33.58595	3
CAACGCA	4365	33.36902	5
AACGCAG	4495	32.403954	6
TAGGTAT	905	32.18912	5
CTTAGGT	895	32.025364	3
TATCAAC	4810	30.487675	2
GTCTTAG	1010	30.248709	1
TTAGGTA	950	30.171263	4
GTACATG	7060	29.159779	1
GGTATAG	1005	28.986221	7
TCTTAGG	1155	28.07902	2
ACATGGG	7190	28.035975	3
ACGCAGA	5235	27.82345	7
TACATGG	7320	27.738787	2
CGCAGAG	5335	27.301924	8
ACCTAAG	1260	27.231222	1
GGTATCA	1890	27.106878	1