SRR6575972_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575972_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1125063
Sequences flagged as poor quality	0
Sequence length	100
%GC	51

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	1512	0.1343924740214548	No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA	1457	0.12950385889501298	No Hit
TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT	1399	0.12434859203440164	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1324	0.11768229868016279	No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT	1298	0.11537131698402667	No Hit
ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG	1235	0.10977163056646605	No Hit
GTATCAACGCAGAGTACATGGGGAATAATTGCAATCCCCGATCCCCATCA	1217	0.10817172016144873	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA	1145	0.10177207854137946	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	1725	0.0	62.75751	1
GGTATCA	530	0.0	47.068134	1
TCAACGC	2330	0.0	45.379333	4
ATCAACG	2370	0.0	44.613438	3
CAACGCA	2395	0.0	44.34396	5
AACGCAG	2490	0.0	42.46339	6
ACGCAGA	2995	0.0	35.30346	7
TATCAAC	3170	0.0	34.247025	2
CGCAGAG	3345	0.0	31.630608	8
GCAGAGT	3705	0.0	28.937954	9
GTACATG	4190	0.0	27.634274	1
TACATGG	4220	0.0	27.17362	2
ACATGGG	4245	0.0	26.789783	3
GGGTACC	775	0.0	26.679796	7
GGTACCT	745	0.0	25.247877	8
AGAGTAC	3245	0.0	24.924984	10-11
TAGTACA	205	2.9909643E-8	22.923326	4
GTACCGT	105	0.0023375377	22.377535	6
GTATATA	190	3.5891935E-7	22.295431	1
GTATACA	300	7.2759576E-12	21.965128	1