SRR6576018_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576018_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1780974
Sequences flagged as poor quality	0
Sequence length	100
%GC	51

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	2714	0.15238852448154774	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	2444	0.13722828070482782	No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT	2112	0.11858679576456478	No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC	2073	0.11639698277459412	No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA	2049	0.1150494055499968	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA	2006	0.11263499635592658	No Hit
TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT	1990	0.11173661153952837	No Hit
GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT	1943	0.1090976061413586	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	1935	0.10864841373315949	No Hit
ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG	1924	0.10803077417188572	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	1898	0.10657089884523863	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	2740	62.546375	1
GGTATCA	950	47.081615	1
TCAACGC	3900	43.376984	4
ATCAACG	3905	43.201103	3
CAACGCA	4075	41.51417	5
AACGCAG	4200	40.502396	6
TATCAAC	4725	36.002132	2
ACCTAAG	970	33.00567	1
ACGCAGA	5165	32.845093	7
CGCAGAG	5505	30.837292	8
GTACATG	7245	29.373209	1
TACATGG	7350	28.834383	2
ACATGGG	7550	27.883835	3
GCAGAGT	6265	27.171516	9
CTAAGAC	1265	26.746283	3
TAAGACA	1400	25.845451	4
CCTAAGA	1305	25.206293	2
AGAGTAC	5190	25.143284	10-11
TAGGTAT	430	24.042282	5
CATGGGG	4460	22.86369	4