SRR6576024_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576024_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	971088
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1406	0.1447860544049561	No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC	1120	0.11533455258431778	No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT	1080	0.11121546142059216	No Hit
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	1069	0.11008271135056762	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA	1053	0.10843507488507735	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	997	0.10266834725586146	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	995	0.10246239269767518	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	987	0.10163857446493006	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	1595	57.459873	1
GGTATCA	500	51.69915	1
TCAACGC	2110	41.422066	4
ATCAACG	2130	41.033123	3
CAACGCA	2180	40.091995	5
AACGCAG	2240	39.437653	6
GTCTTAG	535	34.261116	1
TATCAAC	2625	33.662132	2
GTACATG	3870	32.547268	1
TAGGTAT	385	31.7332	5
ACGCAGA	2805	31.493885	7
TACATGG	3955	31.374046	2
TTAGGTA	420	30.207565	4
CGCAGAG	2945	29.996721	8
ACATGGG	4090	29.985994	3
ACCTAAG	580	29.982264	1
AGGTATA	400	28.193727	6
CTTAGGT	435	28.085707	3
CTAAGAC	775	27.284254	3
GCAGAGT	3290	26.706968	9