SRR6576047_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576047_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1561532
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	3036	0.19442444983516188	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	2336	0.1495966781340376	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	2054	0.13153749010587037	No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC	2028	0.12987245858554292	No Hit
TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT	2028	0.12987245858554292	No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT	2023	0.12955226021624916	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA	1980	0.12679855424032296	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	1915	0.12263597543950427	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	1905	0.12199557870091679	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	1889	0.1209709439191768	No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA	1874	0.12001034881129558	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	1869	0.11969015044200183	No Hit
ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG	1824	0.11680836511835813	No Hit
GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT	1768	0.11322214338226819	No Hit
TTCTAGAGCTAATACATGCCGACGGGCGCTGACCCCCCTTCCCGGGGGGG	1619	0.10368023197731457	No Hit
GTATCAACGCAGAGTACATGGGGAATAATTGCAATCCCCGATCCCCATCA	1580	0.10118268469682337	No Hit
GTATCAACGCAGAGTACATGGGTACCTGGTTGATCCTGCCAGTAGCATAT	1566	0.1002861292628009	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	2930	62.65701	1
GGTATCA	990	57.533768	1
TCAACGC	4210	42.639904	4
ATCAACG	4240	42.449043	3
CAACGCA	4290	41.844757	5
AACGCAG	4405	41.072372	6
TATCAAC	4970	37.065056	2
ACGCAGA	5320	33.830486	7
CGCAGAG	5575	32.303772	8
GTCTTAG	815	31.767113	1
AGGTATA	585	30.525496	6
TTAGGTA	670	30.159811	4
GCAGAGT	6010	30.043882	9
CTTAGGT	600	29.762358	3
ACCTAAG	965	29.268238	1
CTAAGAC	1265	28.604551	3
GTACATG	7270	28.554651	1
GGTACCT	1120	27.709278	8
TACATGG	7445	27.646769	2
TAGGTAT	670	27.354248	5