SRR6576107_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576107_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1026413
Sequences flagged as poor quality	0
Sequence length	100
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	3768	0.3671036902299562	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	3287	0.3202414622573954	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	2949	0.2873112480064068	No Hit
GTTTGGGACTGACCCTAGTCTGTGTCCATGCAGAAGAAGCTAGTTCTACG	1479	0.1440940440154207	No Hit
ACCCTAGTCTGTGTCCATGCAGAAGAAGCTAGTTCTACGGGAAGGAACTT	1323	0.1288954835918875	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1280	0.1247061368084777	No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT	1110	0.10814360301360175	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	1100	0.10716933631978551	No Hit
ATCCTAGGTAACATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAG	1089	0.10609764295658765	No Hit
GAATTTATACTGGGGATGCTGTATGGATAGGAAGGGATGATGGTGGAGTC	1088	0.10600021628720602	No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC	1080	0.10522080293215305	No Hit
ATCCTATTCCCTACCAAAATGAAGATGCTGTTGCTGCTGTGTTTGGGACT	1044	0.10171344283441461	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	1880	58.35011	1
GGTATCA	580	56.821625	1
ATCAACG	2315	46.483864	3
TCAACGC	2330	46.184612	4
CAACGCA	2425	44.18154	5
AACGCAG	2550	42.568615	6
TATCAAC	2740	39.44528	2
GTCTTAG	1030	36.56759	1
TAGGTAT	1000	34.30367	5
CTTAGGT	980	34.04474	3
AGGTATA	1000	33.833755	6
ACGCAGA	3200	33.62817	7
TTAGGTA	1030	32.848305	4
CGCAGAG	3335	32.00693	8
TCTTAGG	1200	31.327553	2
GGTATAG	1120	30.628279	7
ACCAGAT	1475	29.332708	94
GTATAGT	1190	29.241442	8
GCAGAGT	3675	29.173698	9
TATAGTA	1180	29.090744	9