SRR6576111_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576111_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1172509
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1740	0.14839971377618424	No Hit
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	1636	0.13952984582634334	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	1440	0.12281355622856627	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	1424	0.12144896115935998	No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT	1395	0.11897563259642356	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	1363	0.11624644245801098	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA	1271	0.10840002081007481	No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA	1254	0.10695013854904313	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	1224	0.10439152279428131	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	2190	0.0	59.454746	1
GGTATCA	715	0.0	57.195793	1
TCAACGC	3050	0.0	42.056046	4
ATCAACG	3090	0.0	41.51163	3
CAACGCA	3120	0.0	41.11248	5
AACGCAG	3210	0.0	39.959797	6
TATCAAC	3660	0.0	35.31852	2
ACGCAGA	3795	0.0	33.676174	7
TAGGTAT	470	0.0	32.989952	5
AGGTATA	485	0.0	31.969648	6
CGCAGAG	4060	0.0	31.593828	8
CTTAGGT	480	0.0	31.323793	3
GTACATG	5325	0.0	31.248884	1
GGTATAG	500	0.0	31.01056	7
TATATAC	185	9.094947E-12	30.477205	3
GCAGAGT	4325	0.0	29.658022	9
GTCTTAG	715	0.0	29.584032	1
TACATGG	5585	0.0	29.541655	2
TTAGGTA	525	0.0	29.533863	4
ACATGGG	5660	0.0	28.722704	3