SRR6576121_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576121_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1643292
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	2973	0.1809173293608196	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	2766	0.1683206636434669	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	2359	0.1435533064117637	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	2124	0.1292527438824019	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA	2005	0.12201118243136339	No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT	1860	0.1131874310834593	No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC	1849	0.11251804305017002	No Hit
GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA	1835	0.11166609464416549	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	1805	0.10984049091701292	No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA	1792	0.10904939596858014	No Hit
GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT	1687	0.10265978292354615	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	2970	58.24327	1
GGTATCA	985	57.26634	1
ATCAACG	3780	45.00959	3
TCAACGC	3820	44.415253	4
CAACGCA	3960	43.20107	5
AACGCAG	4080	42.045647	6
TATCAAC	4795	35.97757	2
ACGCAGA	5215	32.80465	7
CGCAGAG	5360	31.917208	8
GCAGAGT	5845	29.429634	9
GTACATG	6890	28.039934	1
TACATGG	6930	27.945917	2
CTTAGGT	865	27.710371	3
GGTATAG	900	27.67717	7
ACATGGG	7030	27.5442	3
ACCTAAG	1120	26.860638	1
AGGTATA	920	26.053776	6
TAGGTAT	935	25.6358	5
GTCTTAG	1190	25.280603	1
TTAGGTA	975	25.066116	4