SRR6576121_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576121_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1643292
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	3071	0.18688096820285136	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	2714	0.16515628384973577	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	2391	0.14550061705405978	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	2223	0.13527723618200538	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	1888	0.11489132789546837	No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT	1883	0.1145870606076096	No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC	1801	0.1095970770867259	No Hit
GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT	1786	0.10868427522314962	No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA	1690	0.1028423432962614	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA	1657	0.10083417919639359	No Hit
TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT	1657	0.10083417919639359	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	960	60.894142	1
GTATCAA	2955	59.029526	1
TCAACGC	3835	45.46567	4
ATCAACG	3890	44.945026	3
CAACGCA	3990	43.81725	5
AACGCAG	4130	41.876743	6
TATCAAC	4930	35.65439	2
ACGCAGA	5260	32.880405	7
CGCAGAG	5480	31.304056	8
GTCTTAG	1200	31.03637	1
TAGGTAT	895	30.456503	5
CTTAGGT	845	30.034842	3
GCAGAGT	5825	29.53068	9
TTAGGTA	915	28.249884	4
GTACATG	6875	27.497723	1
TACATGG	6915	27.050741	2
ACATGGG	6920	26.827444	3
GGTATAG	955	26.574522	7
AGGTATA	940	26.49861	6
GGTAATC	335	25.253178	8