SRR6576123_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576123_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1458206
Sequences flagged as poor quality	0
Sequence length	100
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	7856	0.5387441829206573	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	6829	0.4683151763193952	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	6429	0.4408842097755735	No Hit
GTTTGGGACTGACCCTAGTCTGTGTCCATGCAGAAGAAGCTAGTTCTACG	3191	0.21883053560333726	No Hit
ACCCTAGTCTGTGTCCATGCAGAAGAAGCTAGTTCTACGGGAAGGAACTT	3067	0.21032693597475252	No Hit
ATCCTAGGTAACATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAG	2374	0.16280278643758153	No Hit
ATCCTATTCCCTACCAAAATGAAGATGCTGCTGCTGCTGCTGTGTTTGGG	2228	0.15279048364908662	No Hit
TCACATAGTTGTGCAAACCTTTCCTTGATGTCTGAACTCAAATCTGGTTC	2151	0.14751002258940094	No Hit
ATCCTATTCCCTACCAAAATGAAGATGCTGTTGCTGCTGTGTTTGGGACT	2146	0.1471671355076032	No Hit
GAATTTATACTGGGGATGCTGTATGGATAGGAAGGGATGATGGTGGAGTC	2133	0.14627562909492897	No Hit
GTGTAGCCACGATCACAAGAAAGACGTGGTCCTGACAGACAGACAATCCT	2096	0.14373826468962547	No Hit
ATCTATGGTTGCTGACAAAACAGAAAAGGCTGGTGAATATTCTGTGACGT	1955	0.13406884898292834	No Hit
CTGTAAGAGATGAAGAGTGCTCCGAATTATCTATGGTTGCTGACAAAACA	1900	0.13029709108315285	No Hit
GGATAGGTCAATGATATTTTCTCTAAGGATTCCATGCTCCTCACATAGTT	1876	0.12865123309052356	No Hit
GCATTGGATAGGTCAATGATATTTTCTCTAAGGATTCCATGCTCCTCACA	1760	0.12069625279281528	No Hit
CATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAGGATGGAATGCA	1646	0.1128784273278261	No Hit
GGCCTGGAGGCAGCGATTGGCATTGGATAGGTCAATGATATTTTCTCTAA	1562	0.10711792435362356	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	915	60.7615	1
GTATCAA	2900	58.651188	1
ATCAACG	3800	43.663136	3
TCAACGC	3805	43.605762	4
CAACGCA	3960	41.660156	5
TATCAAC	4090	40.911983	2
AACGCAG	4130	40.059135	6
GGTAATC	485	36.823154	8
TTAGGTA	1985	36.465656	4
AGGTATA	2015	36.15477	6
TAGGTAT	2015	36.15477	5
GTCTTAG	2145	35.8037	1
CTTAGGT	2000	35.722137	3
ACGCAGA	4825	33.994392	7
GGTATAG	2160	33.507816	7
GTACTAG	225	33.50465	1
CGCAGAG	4975	32.969437	8
TCTTAGG	2210	32.96577	2
ACCAGAT	2485	32.34288	94
GTATAGT	2320	31.804665	8