SRR6576139_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576139_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1217141
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	2335	0.19184301572291132	No Hit
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	2179	0.1790260947581258	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	1993	0.16374438130011232	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1620	0.13309879463431107	No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT	1526	0.12537577815553003	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA	1365	0.11214805844187321	No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC	1350	0.11091566219525921	No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA	1343	0.11034054394683936	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	1300	0.10680767470654592	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	1221	0.1003170544743789	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	2240	0.0	59.81194	1
GGTATCA	785	0.0	55.69348	1
TCAACGC	3120	0.0	42.328777	4
ATCAACG	3200	0.0	41.270557	3
CAACGCA	3285	0.0	40.202675	5
AACGCAG	3390	0.0	39.0961	6
TATCAAC	3725	0.0	35.841248	2
ACGCAGA	4145	0.0	31.748083	7
GTACATG	5450	0.0	30.793762	1
CGCAGAG	4370	0.0	30.113455	8
TACATGG	5595	0.0	29.575603	2
ACATGGG	5680	0.0	28.96034	3
ACCTAAG	705	0.0	28.67282	1
GCAGAGT	4730	0.0	28.11961	9
GTCTTAG	745	0.0	27.133339	1
GGTAATC	260	1.8189894E-12	25.306885	8
CGTAGCT	130	1.0881658E-5	25.306885	8
GTGTAGG	430	0.0	25.14493	1
CTAAGAC	955	0.0	25.098675	3
AGAGTAC	4290	0.0	24.70434	10-11