SRR6576140_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576140_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1098321
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	2410	0.21942583270282548	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	2039	0.18564700119546107	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	1858	0.1691673017269086	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1429	0.13010768254453844	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	1188	0.1081650992742559	No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT	1156	0.1052515612466665	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA	1142	0.10397688835959615	No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC	1109	0.10097230226864459	No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA	1099	0.10006182163502292	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	1930	59.731956	1
GGTATCA	630	58.257526	1
TCAACGC	2700	41.42449	4
ATCAACG	2725	41.044453	3
CAACGCA	2780	40.232418	5
AACGCAG	2910	38.435097	6
CTTAGGT	620	34.866646	3
AGGTATA	625	33.835804	6
TTAGGTA	655	33.72101	4
TAGGTAT	660	33.465546	5
TATCAAC	3415	33.301872	2
GTCTTAG	795	33.145065	1
CTAAGAC	980	32.608204	3
TAAGACA	1110	32.17619	4
ACGCAGA	3555	31.592394	7
ACCTAAG	885	30.837751	1
GGTATAG	690	30.646976	7
TCTTAGG	830	30.574524	2
CGCAGAG	3805	29.414604	8
GTACATG	4515	28.555565	1