SRR6576149_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576149_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	649041
Sequences flagged as poor quality	0
Sequence length	100
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	1963	0.30244622450661823	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	1464	0.2255635622402899	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1399	0.2155487865943754	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	1380	0.21262139063633884	No Hit
GAATTTATACTGGGGATGCTGTATGGATAGGAAGGGATGATGGTGGAGTC	935	0.14405869582969336	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	918	0.14143944681460802	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	850	0.13096245075426668	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	703	0.10831365044735232	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	682	0.10507810754636455	No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG	678	0.10446181366046213	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	673	0.1036914463030841	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	1780	0.0	38.62839	1
GTACATG	3385	0.0	36.451584	1
TACATGG	3410	0.0	36.244095	2
ACATGGG	3475	0.0	35.160454	3
AGGGTAA	220	0.0	34.176945	6
TCAACGC	1980	0.0	33.464924	4
AACGCAG	1995	0.0	33.44886	6
ATCAACG	1990	0.0	33.060608	3
CAACGCA	2010	0.0	32.965446	5
CATGGGG	1815	0.0	30.2932	4
TAGGTAT	485	0.0	29.06802	5
AAGGGTA	245	0.0	28.771408	5
ATAGTAC	115	4.197349E-6	28.604616	3
TTAGGTA	525	0.0	27.748423	4
GTCTTAG	595	0.0	27.702875	1
GGTACCT	510	0.0	27.658033	8
GTATAGT	630	0.0	27.61413	8
ACGCAGA	2440	0.0	27.348558	7
CTTAGGT	520	0.0	27.111517	3
TATCAAC	2480	0.0	27.096943	2