SRR6576170_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576170_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	466028
Sequences flagged as poor quality	0
Sequence length	100
%GC	51

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1150	0.2467662887208494	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	662	0.1420515505506107	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	622	0.13346837529075506	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	590	0.12660183508287057	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	582	0.12488520003089944	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	544	0.11673118353403658	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	532	0.1141562309560799	No Hit
GCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAGTACGCACGGC	500	0.10728969074819537	No Hit
GCTAAGAGCATCGAGGGGGCGCCGAGAGGCAAGGGGCGGGGACGGGCGGT	497	0.10664595260370621	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	1410	0.0	38.359386	1
ATCCTAT	145	1.8189894E-11	35.679405	1
TAGACGG	70	2.1839386E-4	33.569016	5
ATCAACG	1655	0.0	32.372295	3
TGGGTAC	425	0.0	32.068283	6
TCAACGC	1675	0.0	31.98576	4
CCCTATA	75	3.2739562E-4	31.331081	2
CAACGCA	1730	0.0	31.240526	5
AACGCAG	1765	0.0	30.621027	6
GGGTACC	450	0.0	30.28671	7
GCTATAT	80	4.778583E-4	29.372887	3
CATGGGT	705	0.0	28.664604	4
TACATGG	2615	0.0	28.575382	2
GTACATG	2615	0.0	28.237152	1
ATGGGTA	485	0.0	28.101072	5
GGTACCT	490	0.0	27.814325	8
TATCAAC	1945	0.0	27.545576	2
ACATGGG	2695	0.0	27.203981	3
ACGCAGA	2010	0.0	26.888615	7
CCCGCTA	70	0.008833825	26.855211	3