SRR6576175_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576175_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	97821
Sequences flagged as poor quality	0
Sequence length	100
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	245	0.2504574682327925	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	133	0.13596262561208738	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	129	0.13187352408991934	No Hit
CTATTAACCCTTGGCCTACTCACCAATATCCTCACAATATATCAATGATG	125	0.1277844225677513	No Hit
GATATAGGCTTACTAGGAGGGTGAATACGTAGGCTTGAATTAATGCTACT	116	0.11858394414287321	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	113	0.11551711800124717	No Hit
ATATATAATAGACGAAATCAACAACCCCGTATTAACCGTTAAAACCATAG	106	0.10836119033745309	No Hit
GAATAACCCTGGTCGGTTTGATGTTACTGTTGCTTGATTTAGTCGGCCTG	104	0.10631663957636908	No Hit
GGATATGAGATTGGCTTGAAACCAATTTTAGGGGGTTCGATTCCTTCCTT	104	0.10631663957636908	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GACATAT	20	0.0021570504	70.5	1
GGACACC	25	0.005221769	56.399998	6
CATGGGT	180	0.0	47.000004	4
CATGGGG	210	0.0	44.761906	4
ATGGGTA	95	4.1836756E-10	44.526318	5
ATGGGAC	95	4.1836756E-10	44.526318	5
CCTATTG	75	1.4624675E-7	43.86667	94
ATGGGGC	65	2.758752E-6	43.384617	5
GTATCAA	645	0.0	42.99225	1
ATGGGAT	160	0.0	41.125	5
ACCCTTG	80	2.427896E-7	41.125	7
GTACATG	1055	0.0	40.985783	1
ACATGGG	1040	0.0	40.673077	3
TACATGG	1065	0.0	40.60094	2
AACGCAG	680	0.0	39.397057	6
TGGGATC	60	8.764986E-5	39.166668	6
CGCGAGG	25	0.0016985772	37.6	76-77
AGGCGAG	25	0.0016985772	37.6	80-81
AAGTTAA	50	0.0016944255	37.6	94
CGAGGCG	25	0.0016985772	37.6	78-79