SRR6576176_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576176_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	95200
Sequences flagged as poor quality	0
Sequence length	100
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	242	0.2542016806722689	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	155	0.16281512605042017	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	139	0.14600840336134452	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	123	0.12920168067226892	No Hit
CTATTAACCCTTGGCCTACTCACCAATATCCTCACAATATATCAATGATG	112	0.1176470588235294	No Hit
GATATAGGCTTACTAGGAGGGTGAATACGTAGGCTTGAATTAATGCTACT	107	0.11239495798319328	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	105	0.11029411764705882	No Hit
GGATATGAGATTGGCTTGAAACCAATTTTAGGGGGTTCGATTCCTTCCTT	103	0.10819327731092437	No Hit
GTACATGGGCAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAA	101	0.10609243697478991	No Hit
GAATAACCCTGGTCGGTTTGATGTTACTGTTGCTTGATTTAGTCGGCCTG	99	0.10399159663865545	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	96	0.10084033613445378	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CCGAACT	20	0.0021595524	70.47794	1
CATGGGG	245	0.0	44.108646	4
GTATCAA	605	0.0	41.93729	1
TGGGGCA	60	8.779395E-5	39.154415	6
ACATGGG	910	0.0	37.17518	3
GTACATG	925	0.0	36.57234	1
TACATGG	950	0.0	36.10449	2
ATGGGGC	80	1.1500049E-5	35.23897	5
ATGGGGT	95	9.353098E-7	34.620743	5
AACGCAG	680	0.0	34.54801	6
ATGGGAT	110	7.591552E-8	34.171124	5
GAATAAC	55	0.0027087212	34.171124	1
CCCTGGT	55	0.0027087212	34.171124	7
GGGGCAG	70	2.1740368E-4	33.560925	7
TAATACC	70	2.1740368E-4	33.560925	4
ATGGGAC	60	0.0041483636	31.32353	5
GGGCAGT	60	0.0041483636	31.32353	8
ATCAACG	740	0.0	31.111883	3
ACGCAGA	760	0.0	30.911379	7
CAACGCA	745	0.0	30.903078	5