SRR6576176_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576176_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	95200
Sequences flagged as poor quality	0
Sequence length	100
%GC	43

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	301	0.3161764705882353	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	230	0.2415966386554622	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	170	0.17857142857142858	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	137	0.1439075630252101	No Hit
CTATTAACCCTTGGCCTACTCACCAATATCCTCACAATATATCAATGATG	116	0.12184873949579833	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	109	0.11449579831932773	No Hit
ATATATAATAGACGAAATCAACAACCCCGTATTAACCGTTAAAACCATAG	106	0.11134453781512606	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	98	0.10294117647058824	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGGTATG	35	2.9257542E-4	53.70708	7
TGGGTAT	55	8.733314E-7	51.26585	6
TGTATCG	45	0.0010073272	41.794125	9
CATGGGT	180	0.0	41.772175	4
ATGGGTA	115	6.002665E-11	40.864086	5
GTATCAA	775	0.0	34.63587	1
CGAGAAA	55	0.002692423	34.213173	94
GTATGGC	55	0.002699378	34.19519	9
GGTATGG	55	0.002699378	34.19519	8
CCTACAG	35	2.1731864E-4	33.584564	68-69
TGGGGCA	70	2.1717546E-4	33.566925	6
GTACATG	1035	0.0	33.21509	1
ACATGGG	1010	0.0	32.56989	3
CATGGGG	260	0.0	32.534096	4
ACGTGCC	30	0.004149734	31.33736	66-67
TACATGG	1095	0.0	31.329134	2
GATACAT	60	0.0041447347	31.329132	2
ACCCTTG	60	0.0041447347	31.329132	7
ACATCCC	45	2.5850302E-5	31.329132	46-47
TGCAAAA	30	0.004155074	31.329132	78-79