SRR6576221_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576221_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	180316
Sequences flagged as poor quality	0
Sequence length	100
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	403	0.22349652831695466	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	344	0.19077619290578762	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	281	0.15583752967013464	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	256	0.14197298076709777	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	249	0.13809090707424745	No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG	228	0.12644468599569644	No Hit
ACTTTATTCTGTAGACATATCCAGGGACCCAGCCCTAGGCCAGAAGCTCT	203	0.11258013709265954	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	191	0.10592515361920185	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTAGTAC	20	0.0021365953	70.69397	1
GTATAAC	50	2.950928E-5	47.12931	1
GTATCAA	590	0.0	44.732903	1
TGTAGCG	45	0.001011827	41.776543	2
GTACATG	1300	0.0	39.15358	1
TACATGG	1325	0.0	38.66301	2
ATGGGAC	110	1.7789716E-9	38.453407	5
ACATGGG	1325	0.0	37.953594	3
CATGGGA	590	0.0	37.43957	4
CAACGCA	750	0.0	36.345596	5
AACGCAG	740	0.0	36.201633	6
ATCAACG	755	0.0	34.8599	3
TCAACGC	780	0.0	34.34514	4
CATGGGT	275	0.0	34.18081	4
GGTACCT	165	8.54925E-11	31.332409	8
CATGGGG	520	0.0	30.729862	4
ATGGGAT	185	9.094947E-12	30.485586	5
GGGTACC	185	9.094947E-12	30.485586	7
TATCAAC	880	0.0	29.908207	2
ACGCAGA	880	0.0	29.908207	7