SRR6576231_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576231_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	399250
Sequences flagged as poor quality	0
Sequence length	100
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1063	0.2662492172824045	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	573	0.14351909830933	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	544	0.13625547902316842	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	507	0.12698810269254854	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	483	0.12097683155917345	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	469	0.11747025673137133	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	461	0.11546649968691297	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	458	0.11471509079524107	No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG	423	0.10594865372573577	No Hit
AGCTAATACATGCCGACGGGCGCTGACCCCCCTTCCCGGGGGGGGATGCG	415	0.1039448966812774	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	1245	0.0	37.825195	1
GTATATC	65	1.413233E-4	36.147778	3
GTACATG	2575	0.0	35.296417	1
ATGGGTA	455	0.0	35.114983	5
TACATGG	2565	0.0	34.992176	2
GGTACCT	475	0.0	34.64746	8
ACATGGG	2580	0.0	34.60659	3
GGGTACC	480	0.0	32.30707	7
AACGCAG	1445	0.0	31.544878	6
GTATAAG	90	2.5551934E-5	31.394913	1
CATGGGT	680	0.0	31.097721	4
TATACAG	200	0.0	30.544872	5
TCAACGC	1495	0.0	30.175537	4
CAACGCA	1525	0.0	29.890062	5
ATCAACG	1510	0.0	29.875778	3
CCTATAC	95	3.750505E-5	29.679228	3
TGGGTAC	525	0.0	29.5379	6
ATTAGGC	80	4.7800568E-4	29.37007	3
GTCTATA	65	0.0060907067	28.97992	1
TATAGGA	130	3.3272954E-7	28.918222	2