SRR6576235_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576235_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	306433
Sequences flagged as poor quality	0
Sequence length	100
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	514	0.1677365035750066	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	412	0.13445027134805979	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	394	0.12857623036683385	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	365	0.11911249767485878	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	311	0.10149037473118104	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTCGATA	25	0.0052170446	56.44185	94
GTATCAA	835	0.0	43.987064	1
GTACATG	1850	0.0	37.925507	1
TATAGGT	50	0.0017020674	37.591057	7
TACATGG	1900	0.0	36.36638	2
AACGCAG	1020	0.0	35.47195	6
ACATGGG	1925	0.0	35.399952	3
TCAACGC	1075	0.0	34.09978	4
ATCAACG	1090	0.0	33.199356	3
ATAGACT	85	1.7514969E-5	33.173996	4
CAACGCA	1105	0.0	32.748684	5
CATGGGT	515	0.0	31.939362	4
TTAGTAC	60	0.004157781	31.330996	3
ATGGGTG	210	0.0	31.330992	5
ACGCAGA	1230	0.0	29.033743	7
CATGGGA	915	0.0	28.762878	4
CGCAGAG	1270	0.0	28.142256	8
TATCAAC	1310	0.0	27.987213	2
ATAATGG	215	6.548362E-11	26.2306	3
CATGGGG	820	0.0	25.790756	4