SRR6576262_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576262_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	648761
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1815	0.2797640425364657	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	972	0.1498240492261403	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	904	0.13934253137904404	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	872	0.13441005239217524	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	863	0.1330227926771184	No Hit
TTCTAGAGCTAATACATGCCGACGGGCGCTGACCCCCCTTCCCGGGGGGG	707	0.10897695761613291	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	705	0.10866867767945361	No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG	678	0.10450689853428305	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	672	0.10358205872424513	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	1505	0.0	48.139053	1
CCGTATG	50	3.000568E-5	47.01958	9
TACCGTA	50	3.0101532E-5	46.994217	7
ACACGAC	60	8.826227E-5	39.16185	3
ACATGGG	3625	0.0	35.780426	3
GTACATG	3700	0.0	35.60161	1
TACATGG	3715	0.0	35.546097	2
GTACCGT	120	4.2055035E-9	35.245663	6
TCAACGC	2085	0.0	34.48497	4
ATCAACG	2130	0.0	33.75641	3
CAACGCA	2145	0.0	33.52035	5
AACGCAG	2170	0.0	33.35074	6
ACCGTAT	85	1.7486149E-5	33.1903	8
CATGGGT	985	0.0	32.91981	4
ATGGGTA	820	0.0	31.520514	5
ACGCAGA	2450	0.0	29.731037	7
CGCAGAG	2485	0.0	28.949684	8
GGGTACC	855	0.0	28.58128	7
CATGGGG	1770	0.0	28.143429	4
GGTACCT	895	0.0	27.844	8