SRR6576279_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576279_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	306009
Sequences flagged as poor quality	0
Sequence length	100
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	757	0.2473783450813538	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	400	0.13071510968631642	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	389	0.12712044416994273	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	388	0.12679365639572693	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	369	0.1205846886856269	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	362	0.11829717426611636	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	342	0.11176141878180054	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	331	0.10816675326542682	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	309	0.10097742223267943	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTACACG	20	0.0021616977	70.49804	6
ACATGGG	2070	0.0	39.733192	3
GTACATG	2210	0.0	38.085484	1
TACATGG	2230	0.0	37.74391	2
ATGGGAG	395	0.0	35.69521	5
CATGGGA	1070	0.0	33.82149	4
GTATCAA	1015	0.0	33.818592	1
CATGGGC	350	0.0	33.570496	4
CATGGGT	470	0.0	30.99914	4
ATGGGTA	315	0.0	29.84044	5
CATATAG	65	0.0061480454	28.922274	3
CATGGGG	760	0.0	28.446577	4
TCAACGC	1170	0.0	28.118876	4
ATCAACG	1175	0.0	27.999224	3
GGGTACC	290	0.0	27.550959	7
AACGCAG	1205	0.0	27.302145	6
CAACGCA	1210	0.0	27.189327	5
TAATACC	90	9.503216E-4	26.110384	4
ATGGGAT	275	0.0	25.635649	5
GGTACCT	315	0.0	25.364374	8