SRR6576280_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576280_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	303719
Sequences flagged as poor quality	0
Sequence length	100
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	820	0.2699864019043919	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	452	0.14882177275705505	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	452	0.14882177275705505	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	417	0.13729796291967244	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	393	0.1293959218883244	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	390	0.1284081667594059	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	363	0.11951837059913935	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	331	0.10898231589067525	No Hit
GCTAAGAGCATCGAGGGGGCGCCGAGAGGCAAGGGGCGGGGACGGGCGGT	327	0.10766530905211724	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	324	0.10667755392319875	No Hit
CTCTAGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCGGCGACGACCC	310	0.10206802998824571	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGACCGT	40	5.678513E-4	46.98584	6
ACATGGG	1995	0.0	38.389435	3
GTACATG	2055	0.0	38.220898	1
TACATGG	2055	0.0	37.98577	2
GTATAAC	75	7.390605E-6	37.62584	1
AGGCGTG	75	7.4409127E-6	37.588673	7
CATGGGG	740	0.0	36.82674	4
CTATTCA	65	1.4135458E-4	36.142956	9
GTATCAA	1055	0.0	31.65207	1
CCTTATG	60	0.004145592	31.3497	2
ATGGGGA	370	0.0	30.4773	5
CATGGGA	980	0.0	29.725739	4
ATGGGTA	290	0.0	29.163624	5
ATGGGAT	345	0.0	28.600077	5
TCAACGC	1110	0.0	28.360823	4
CATGGGC	350	0.0	28.191505	4
ATCAACG	1135	0.0	27.736135	3
AACGCAG	1135	0.0	27.322165	6
CAACGCA	1140	0.0	27.20233	5
GCCTTAT	70	0.008796442	26.8756	1