SRR6576280_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576280_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	303719
Sequences flagged as poor quality	0
Sequence length	100
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	776	0.25549932668025377	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	463	0.15244354156308956	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	445	0.14651701078957852	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	387	0.1274204116304874	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	379	0.12478639795337138	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	376	0.12379864282445288	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	363	0.11951837059913935	No Hit
AGCTAATACATGCCGACGGGCGCTGACCCCCCTTCCCGGGGGGGGATGCG	339	0.11161632956779129	No Hit
TTCTAGAGCTAATACATGCCGACGGGCGCTGACCCCCCTTCCCGGGGGGG	328	0.10799456076175674	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	323	0.10634830221355925	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	309	0.10173877827860621	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTAACGC	15	6.901365E-4	93.986	3
TTATCGC	25	0.00522179	56.428764	94
TTAACAC	45	0.0010135185	41.771557	3
CATGGGG	720	0.0	36.550114	4
ATGGGTA	330	0.0	35.600758	5
GTATCAA	955	0.0	35.52285	1
GGGTACC	265	0.0	35.46642	7
ACATGGG	2050	0.0	35.30206	3
CATGGGT	440	0.0	34.176727	4
GTACATG	2210	0.0	34.111942	1
TACATGG	2165	0.0	34.08368	2
GGTACCT	280	0.0	33.588547	8
ATAGACG	60	0.0041458444	31.349314	8
TAGACGA	65	0.006131838	28.937828	9
AACGCAG	1125	0.0	28.822376	6
TCAACGC	1150	0.0	27.787167	4
CAACGCA	1180	0.0	27.47896	5
ATGGGGA	445	0.0	27.456587	5
CTAATCG	35	0.008810863	26.870838	92-93
TATACAG	105	7.4114236E-5	26.853144	5