SRR6576286_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576286_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	276855
Sequences flagged as poor quality	0
Sequence length	100
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	596	0.21527514402846257	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	337	0.12172436835166424	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	327	0.11811236929078399	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	325	0.11738996947860793	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	323	0.1166675696664319	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	322	0.11630636976034385	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	318	0.11486157013599176	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	311	0.11233317079337558	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	310	0.11197197088728757	No Hit
TTCTAGAGCTAATACATGCCGACGGGCGCTGACCCCCCTTCCCGGGGGGG	294	0.10619277238987919	No Hit
GCTAAGAGCATCGAGGGGGCGCCGAGAGGCAAGGGGCGGGGACGGGCGGT	279	0.1007747737985588	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTACATG	2065	0.0	38.933113	1
GTATCAA	895	0.0	38.873333	1
TACATGG	2095	0.0	38.600018	2
ACATGGG	2025	0.0	38.295265	3
ATGGGAG	500	0.0	35.71904	5
GGGTACC	240	0.0	35.249054	7
GGTATAT	55	0.0027090171	34.19325	1
GGTACCT	250	0.0	33.83909	8
CATGGGT	430	0.0	31.696821	4
ATCCGCG	30	0.0041596834	31.332493	92-93
ATCAACG	1110	0.0	31.33249	3
AACGCAG	1130	0.0	31.193851	6
CATGGGG	650	0.0	31.09147	4
ATGGGTA	305	0.0	30.818844	5
CAACGCA	1160	0.0	29.98195	5
TCAACGC	1160	0.0	29.98195	4
ATGGGCG	110	2.9583498E-6	29.908287	5
CATGGGA	1165	0.0	29.046429	4
GTTGTAT	65	0.0061361752	28.93275	1
CATGGGC	445	0.0	28.516087	4