SRR6576299_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576299_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	463454
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1361	0.2936645276553876	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	783	0.1689488061382575	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	708	0.15276597030125966	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	699	0.15082403000081993	No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG	563	0.12147915434973051	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	537	0.11586910459290459	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	533	0.11500602001493136	No Hit
GTATCAACGCAGAGTACATGGGTACCTGGTTGATCCTGCCAGTAGCATAT	530	0.11435870658145146	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	498	0.1074540299576657	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	470	0.10141243791185317	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTTAGG	25	0.005235691	56.3956	2
GTATCAA	990	0.0	49.50876	1
ACATGGG	2245	0.0	37.890137	3
GTACATG	2385	0.0	37.347137	1
TACATGG	2360	0.0	37.23862	2
TCAACGC	1345	0.0	35.989758	4
CATGGGG	975	0.0	35.66901	4
ATCAACG	1360	0.0	35.592808	3
CAACGCA	1375	0.0	34.862732	5
AACGCAG	1405	0.0	34.118336	6
GTATAGA	75	3.220546E-4	31.41902	1
TCTATAC	75	3.274047E-4	31.330889	3
CATGGGT	620	0.0	31.07822	4
ACGCAGA	1580	0.0	30.339405	7
TTATACC	80	4.7787154E-4	29.372707	4
TATCAAC	1675	0.0	29.179813	2
ATGGGTA	435	0.0	29.170137	5
GGATACG	65	0.0060689016	29.00217	1
CGCAGAG	1700	0.0	28.1978	8
GTATATA	155	4.937101E-8	27.364954	1