SRR6576322_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576322_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	252845
Sequences flagged as poor quality	0
Sequence length	100
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	568	0.22464355632897626	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	348	0.13763372817338684	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	324	0.12814174692004984	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	317	0.12537325238782654	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	304	0.12023176254226899	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	292	0.11548577191560047	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	286	0.11311277660226622	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	262	0.10362079534892918	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TACGACG	85	3.9475526E-7	38.69562	5
ACGACGG	95	9.4314964E-7	34.6224	6
GTATAAG	55	0.0027165492	34.172756	1
TACATGG	1770	0.0	33.97969	2
GTACATG	1790	0.0	33.60003	1
ACATGGG	1785	0.0	32.904438	3
CGACGGT	100	1.4083143E-6	32.891277	7
GACGGTA	105	2.0612115E-6	31.325027	8
GTCTTAT	75	3.2734603E-4	31.325027	1
ACGGTAT	105	2.0612115E-6	31.325027	9
CATGGGG	650	0.0	29.638294	4
GTATAGT	80	4.7778725E-4	29.367214	1
ATGGGAG	335	0.0	28.052261	5
CATGGGC	340	0.0	27.639729	4
GTATCAA	940	0.0	27.492708	1
CTACGAC	120	5.831589E-6	27.409397	4
ATGGGGG	245	0.0	26.850023	5
TAATACT	105	7.412451E-5	26.850023	4
GTAATAG	70	0.008834641	26.850021	1
ACATAGG	70	0.008834641	26.850021	3