SRR6576323_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576323_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	364909
Sequences flagged as poor quality	0
Sequence length	100
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	804	0.2203289039185112	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	454	0.12441458007338817	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	429	0.11756355694159366	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	420	0.11509718861414764	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	412	0.11290486121197339	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	397	0.10879424733289669	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	383	0.10495767437909177	No Hit
TTCTAGAGCTAATACATGCCGACGGGCGCTGACCCCCCTTCCCGGGGGGG	373	0.10221726512637398	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TATATCG	15	6.8987673E-4	93.998764	5
ATATCGC	15	6.8987673E-4	93.998764	6
TACACGA	40	5.671964E-4	46.999386	5
GTATTAT	70	4.6226014E-6	40.29071	1
GGGCGCA	50	0.001700615	37.599506	7
TAGTGCC	50	0.001700615	37.599506	7
GTATCAA	1210	0.0	36.9054	1
GTACATG	2530	0.0	36.78717	1
CATGGGT	550	0.0	35.890438	4
TACATGG	2605	0.0	35.728035	2
ACATGGG	2640	0.0	35.24954	3
GGTACCT	395	0.0	34.505875	8
ATGGGTA	415	0.0	33.975456	5
CATGGGC	500	0.0	31.959581	4
GGGTACC	415	0.0	31.710426	7
GTCTAGC	90	2.5869209E-5	31.337214	1
ACCGCTT	60	0.0041575623	31.33292	8
AACGCAG	1520	0.0	29.374617	6
ATGGGCG	65	0.0061491355	28.922697	5
TGGGTAC	440	0.0	28.84053	6