SRR6576324_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576324_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	335106
Sequences flagged as poor quality	0
Sequence length	100
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	733	0.21873675792137412	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	527	0.15726367179340267	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	472	0.1408509546233132	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	407	0.12145410705866203	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	404	0.12055886794029352	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	400	0.11936521578246884	No Hit
TTCTAGAGCTAATACATGCCGACGGGCGCTGACCCCCCTTCCCGGGGGGG	374	0.11160647675660836	No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG	374	0.11160647675660836	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	358	0.10683186812530959	No Hit
CTCTAGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCGGCGACGACCC	350	0.10444456380966022	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	1210	0.0	41.98741	1
TAATACC	70	4.630605E-6	40.27913	4
GTACATG	2275	0.0	37.21961	1
TACATGG	2260	0.0	36.803715	2
ACATGGG	2255	0.0	35.009796	3
AACGCAG	1435	0.0	34.712093	6
CATGGGG	710	0.0	34.41691	4
ATCAACG	1525	0.0	32.66351	3
TCAACGC	1570	0.0	31.727297	4
ACGCAGA	1580	0.0	31.531199	7
CAACGCA	1585	0.0	31.427038	5
GTCTTAG	120	1.633689E-7	31.360968	1
CGCAGAG	1630	0.0	30.582233	8
GCAGAGT	1790	0.0	27.848629	9
GTCCATA	85	6.770948E-4	27.67144	1
CATGGGA	1405	0.0	27.42612	4
TACCGTC	120	5.8276473E-6	27.416277	7
ATAATAC	120	5.834414E-6	27.412184	3
TATCAAC	1925	0.0	27.096867	2
ACCGTCG	140	6.313476E-7	26.872803	8