SRR6576331_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576331_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	244747
Sequences flagged as poor quality	0
Sequence length	100
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	471	0.19244362545812616	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	317	0.12952150588158384	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	290	0.11848970569608616	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	279	0.11399526858347599	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	262	0.10704932031853301	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	253	0.10337205359003379	No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG	249	0.10173771282181192	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTACATG	1585	0.0	38.05064	1
GAGCGTG	50	0.0017007907	37.59379	7
GTATCAA	915	0.0	37.590927	1
TACATGG	1605	0.0	37.19909	2
ACATGGG	1675	0.0	35.068832	3
ACCGTCG	55	0.0027041822	34.20413	8
ATACCGT	55	0.002715049	34.17617	6
GGTACCT	155	4.0017767E-11	33.376606	8
ATGGGTA	200	0.0	32.894566	5
ATGGGAG	360	0.0	32.6335	5
AACGCAG	1050	0.0	32.223248	6
TCAACGC	1060	0.0	31.919254	4
CATGGGT	370	0.0	31.75151	4
ATCAACG	1070	0.0	31.620945	3
CATGGGA	1015	0.0	31.482481	4
GTATAGG	60	0.004104205	31.411596	1
GGGTACC	180	7.2759576E-12	31.32816	7
CAACGCA	1105	0.0	30.619375	5
ACGCAGA	1135	0.0	29.396025	7
CGCAGAG	1145	0.0	29.163126	8