SRR6576334_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576334_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	449713
Sequences flagged as poor quality	0
Sequence length	100
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1098	0.24415571709067782	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	665	0.1478720873090171	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	622	0.13831043354317088	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	520	0.11562930135441939	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	504	0.11207147669736033	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	499	0.11095965649202935	No Hit
AGCTAATACATGCCGACGGGCGCTGACCCCCCTTCCCGGGGGGGGATGCG	474	0.10540055546537459	No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG	473	0.1051781914243084	No Hit
TTCTAGAGCTAATACATGCCGACGGGCGCTGACCCCCCTTCCCGGGGGGG	455	0.10117563868511695	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	1075	0.0	45.602634	1
GTACATG	2390	0.0	34.90924	1
TCAACGC	1350	0.0	34.811726	4
ATCAACG	1395	0.0	34.362545	3
CAACGCA	1380	0.0	34.05495	5
AACGCAG	1445	0.0	33.82399	6
ACATGGG	2405	0.0	33.805733	3
TACATGG	2540	0.0	32.56404	2
ATGGGTA	465	0.0	30.31989	5
CTAGAAC	110	2.9652E-6	29.906439	3
ATGGGAT	355	0.0	29.124176	5
GTATATC	65	0.0060631735	29.007593	1
ACGCAGA	1665	0.0	28.79024	7
CATGGGT	670	0.0	28.75864	4
GTATAGG	165	2.8630893E-9	28.568083	1
CATGGGG	1135	0.0	28.156092	4
CGCAGAG	1705	0.0	28.114807	8
TATCAAC	1780	0.0	26.930195	2
CATGGGA	1105	0.0	26.3687	4
GGTACCT	505	0.0	26.057095	8