SRR6576335_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576335_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	406302
Sequences flagged as poor quality	0
Sequence length	100
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1254	0.30863741748748463	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	683	0.16810155992340672	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	633	0.15579544279870639	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	553	0.13610565539918582	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	553	0.13610565539918582	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	541	0.13315218728925773	No Hit
GCTAAGAGCATCGAGGGGGCGCCGAGAGGCAAGGGGCGGGGACGGGCGGT	485	0.11936933610959335	No Hit
GCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAGTACGCACGGC	461	0.11346239988973719	No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG	452	0.11124729880729112	No Hit
GATTAAGCCATGCATGTCTAAGTACGCACGGCCGGTACAGTGAAACTGCG	437	0.10755546366988103	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	425	0.10460199555995295	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	1035	0.0	41.781006	1
ACATGGG	2355	0.0	39.908333	3
GTACATG	2495	0.0	38.62022	1
TACATGG	2575	0.0	37.242413	2
CATGGGG	1105	0.0	36.998276	4
AACGCAG	1160	0.0	34.433838	6
CATGGGT	645	0.0	34.242275	4
CAACGCA	1205	0.0	33.92788	5
TCAACGC	1195	0.0	33.818558	4
ATCAACG	1205	0.0	33.537903	3
ATGGGTA	470	0.0	30.99476	5
ACGCAGA	1345	0.0	29.697586	7
CGCAGAG	1370	0.0	29.498667	8
GGTACCT	495	0.0	29.429373	8
GGGTACC	505	0.0	28.846613	7
TGCCCGC	115	4.185098E-6	28.610905	1
ATGGGGA	710	0.0	28.459982	5
GCATTAA	105	7.40607E-5	26.859219	1
GTATGAT	105	7.40607E-5	26.859219	1
ATAGTAC	70	0.008836695	26.852608	8