SRR6576335_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576335_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	406302
Sequences flagged as poor quality	0
Sequence length	100
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1101	0.2709806990859016	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	622	0.1530880970312723	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	596	0.14668891612642812	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	537	0.13216769791928173	No Hit
AGCTAATACATGCCGACGGGCGCTGACCCCCCTTCCCGGGGGGGGATGCG	494	0.12158443719203942	No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG	476	0.1171542350271473	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	472	0.11616974565717127	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	472	0.11616974565717127	No Hit
TTCTAGAGCTAATACATGCCGACGGGCGCTGACCCCCCTTCCCGGGGGGG	456	0.11223178817726717	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	433	0.106570974299905	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	414	0.10189464979251886	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	1085	0.0	41.654198	1
GTACATG	2245	0.0	36.488007	1
ACATGGG	2270	0.0	36.02398	3
TACATGG	2330	0.0	35.504097	2
CATGGGG	1015	0.0	34.263676	4
TCAACGC	1335	0.0	33.795452	4
AACGCAG	1375	0.0	33.150024	6
CAACGCA	1370	0.0	32.932064	5
ATCAACG	1385	0.0	32.5754	3
GTGTAAT	160	5.820766E-11	32.366066	1
GTACTAT	60	0.0041242656	31.385279	1
ACGCAGA	1490	0.0	30.27609	7
GTACTTT	1120	0.0	29.84404	1
ACCTAAG	80	4.729402E-4	29.423698	1
CGCAGAG	1520	0.0	29.387466	8
CATGGGT	640	0.0	29.372997	4
TATAGAG	100	5.317648E-5	28.198082	5
GGTACCT	435	0.0	28.103878	8
ATAGACG	85	6.791578E-4	27.658792	8
TAATCGT	70	0.008805872	26.871853	94