SRR6576345_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576345_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	482024
Sequences flagged as poor quality	0
Sequence length	100
%GC	51

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1275	0.26450965097173584	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	827	0.17156822066951022	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	723	0.14999253149220784	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	670	0.13899722835377493	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	656	0.13609280865683038	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	575	0.11928866612450832	No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG	573	0.11887374902494481	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	484	0.10040993809436874	No Hit
TTCTAGAGCTAATACATGCCGACGGGCGCTGACCCCCCTTCCCGGGGGGG	483	0.100202479544587	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	1230	0.0	37.922592	1
GTACATG	2875	0.0	37.69276	1
GTATAAG	115	2.7030183E-9	36.873352	1
TACATGG	2955	0.0	36.58481	2
ACATGGG	2960	0.0	36.364216	3
TATAAGC	55	0.0027144516	34.184383	2
CATGGGG	1550	0.0	33.6571	4
ATGGGTA	495	0.0	32.281902	5
TTAACTC	60	0.004157079	31.335686	3
CATGGGT	680	0.0	30.41089	4
GGGTACC	510	0.0	29.489351	7
CATTACA	115	4.1873027E-6	28.610842	2
AACGCAG	1615	0.0	28.519306	6
GGTACCT	530	0.0	28.376547	8
TCAACGC	1620	0.0	28.141169	4
CAACGCA	1645	0.0	27.999195	5
TGGGTAC	555	0.0	27.945145	6
ATCAACG	1625	0.0	27.768238	3
GTACATT	85	6.712889E-4	27.715265	1
GTATAGG	85	6.712889E-4	27.715265	1