SRR6576346_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576346_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	433345
Sequences flagged as poor quality	0
Sequence length	100
%GC	51

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1250	0.2884537723984354	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	718	0.16568784686566132	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	662	0.1527651178622114	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	623	0.1437653601633802	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	594	0.13707323264373653	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	590	0.13615018057206152	No Hit
GCTAAGAGCATCGAGGGGGCGCCGAGAGGCAAGGGGCGGGGACGGGCGGT	480	0.11076624860099919	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	464	0.10707404031429922	No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG	462	0.10661251427846173	No Hit
GCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAGTACGCACGGC	459	0.10592022522470548	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	448	0.10338183202759925	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATATTAG	50	0.0017026017	37.59215	1
TACATGG	2700	0.0	36.378086	2
GTACATG	2720	0.0	36.106434	1
ACATGGG	2730	0.0	35.4578	3
TAATACT	55	0.0027179294	34.174683	4
GTATCAA	1200	0.0	31.718378	1
CATGGGG	1350	0.0	30.630642	4
TTAGGAT	100	5.3235533E-5	28.194115	4
TGGGTAC	540	0.0	27.846039	6
AACGCAG	1335	0.0	27.80693	6
GGTACCT	525	0.0	27.746588	8
GGGTACC	525	0.0	27.746588	7
CATGGGT	735	0.0	27.490858	4
ATGGGTA	530	0.0	27.484827	5
GTATATA	105	7.421623E-5	26.851536	1
TCAACGC	1410	0.0	26.6611	4
CAACGCA	1420	0.0	26.473347	5
TTTACAC	160	6.9090675E-8	26.431982	3
ATGGGGG	465	0.0	26.274086	5
TATTAGT	90	9.513255E-4	26.108675	2