SRR6576352_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576352_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	169355
Sequences flagged as poor quality	0
Sequence length	100
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	488	0.2881521065218033	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	416	0.24563786129727497	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	314	0.1854093472291931	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	252	0.14879985828584924	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	232	0.13699034572348026	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	220	0.12990463818605885	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	216	0.12754273567358507	No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG	186	0.10982846683003158	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	181	0.10687608868943935	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	175	0.10333323492072864	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	174	0.10274275929261019	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTACACG	45	0.0010028073	41.851128	1
GTACTAG	45	0.0010028073	41.851128	1
GTATCAA	655	0.0	40.253754	1
GTACATG	1195	0.0	40.18759	1
TACATGG	1210	0.0	39.619087	2
ACATGGG	1250	0.0	37.975285	3
AACGCAG	690	0.0	37.463062	6
CATGGGG	510	0.0	35.018948	4
ATGGGTA	190	0.0	34.630928	5
CATGGGT	285	0.0	34.630924	4
ATCAACG	810	0.0	32.493214	3
ATGGGGT	145	7.348717E-10	32.413185	5
TCAACGC	820	0.0	32.096954	4
CATGGGA	480	0.0	31.332745	4
ATTGACC	60	0.004151445	31.332745	8
ATGGGAT	90	2.5813206E-5	31.332743	5
CAACGCA	830	0.0	31.143991	5
ACGCAGA	830	0.0	31.143991	7
CGCAGAG	845	0.0	30.591139	8
TGGGTAC	185	9.094947E-12	30.48591	6