SRR6576353_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576353_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	155903
Sequences flagged as poor quality	0
Sequence length	100
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	756	0.48491690345920224	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	381	0.24438272515602652	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	303	0.19435161606896598	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	230	0.1475276293592811	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	221	0.14175480908000487	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	207	0.13277486642335298	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	206	0.13213344194787785	No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG	192	0.12315349929122596	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	169	0.10840073635529784	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	164	0.10519361397792217	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACCTATC	25	0.0052313926	56.389606	7
TCTATAC	25	0.0052313926	56.389606	3
CTAGTAC	40	5.666691E-4	46.99134	3
CTCGATA	20	5.675472E-4	46.99134	64-65
TAGTACT	40	5.666691E-4	46.99134	4
GGTTAGC	55	5.2478314E-5	42.746822	8
TGGGTTA	55	5.267752E-5	42.719402	6
ATGGGTA	145	0.0	42.130165	5
GTATCAA	860	0.0	41.112675	1
CTGTGCG	70	4.594993E-6	40.304142	9
GTACATG	1265	0.0	38.01216	1
GGGTACC	125	1.4915713E-10	37.593075	7
ATGGGGC	200	0.0	37.59307	5
GCTCGAT	25	0.0017016653	37.59307	64-65
TACATGG	1265	0.0	37.518776	2
AACGCAG	965	0.0	36.034813	6
ACATGGG	1280	0.0	35.977745	3
TCAACGC	995	0.0	34.948334	4
ATCAACG	990	0.0	34.650177	3
CAACGCA	995	0.0	34.47606	5