SRR6576354_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576354_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	439658
Sequences flagged as poor quality	0
Sequence length	100
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	960	0.21835153687639028	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	608	0.13828930668838052	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	517	0.11759140058863934	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	516	0.11736395107105976	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	505	0.11486200637768447	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	475	0.10803852085029728	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	462	0.10508167712176282	No Hit
GCTAAGAGCATCGAGGGGGCGCCGAGAGGCAAGGGGCGGGGACGGGCGGT	449	0.10212483339322838	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	1100	0.0	44.44938	1
GTACATG	3095	0.0	42.684547	1
ACATGGG	3035	0.0	42.429577	3
TACATGG	3090	0.0	42.297173	2
CATGGGA	1500	0.0	37.9115	4
CATGGGG	1195	0.0	34.21592	4
TACCGTG	55	0.0027158365	34.180164	7
CATGGGT	685	0.0	33.61881	4
ATGGGAG	560	0.0	33.569805	5
ATCAACG	1395	0.0	33.35322	3
TCAACGC	1395	0.0	33.35322	4
ATGGGTA	440	0.0	33.112034	5
CAACGCA	1435	0.0	33.078537	5
AACGCAG	1445	0.0	32.84962	6
GAGTGCG	60	0.0041591986	31.331816	9
GGGTACC	405	0.0	30.171377	7
ATGGGAT	525	0.0	29.541428	5
TTCGAAA	80	4.777491E-4	29.373579	9
ATGGGGG	420	0.0	29.09383	5
CCGAACT	65	0.0061412975	28.931547	1