SRR6576359_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576359_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	168452
Sequences flagged as poor quality	0
Sequence length	100
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	388	0.2303326763707169	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	360	0.21371073065324245	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	204	0.12110274737017074	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	201	0.11932182461472704	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	198	0.11754090185928336	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	196	0.1163536200223209	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	180	0.10685536532662122	No Hit
GCTAAGAGCATCGAGGGGGCGCCGAGAGGCAAGGGGCGGGGACGGGCGGT	175	0.1038871607342151	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	173	0.10269987889725263	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTAACGA	25	0.005228308	56.399998	3
GACCGTG	35	2.9303043E-4	53.714287	7
GTATCAA	845	0.0	43.384617	1
GGACCGT	45	0.0010114904	41.77778	6
GTACATG	1730	0.0	38.84971	1
TACATGG	1740	0.0	38.62644	2
CATGGGA	1025	0.0	38.517075	4
ACATGGG	1770	0.0	37.971752	3
ATGGGAG	425	0.0	37.6	5
TATAAAG	80	1.1527976E-5	35.25	2
TGGGAGA	205	0.0	34.390244	6
CATGGGC	250	0.0	33.84	4
AACGCAG	1045	0.0	33.73206	6
TCTTAGG	70	2.1771267E-4	33.57143	2
ATCAACG	1070	0.0	32.943924	3
TCAACGC	1080	0.0	32.63889	4
CAACGCA	1090	0.0	32.339447	5
TCATGTA	75	3.2637804E-4	31.333332	2
GTATATA	75	3.2637804E-4	31.333332	1
TATCAAC	1155	0.0	30.51948	2