SRR6576376_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576376_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	535159
Sequences flagged as poor quality	0
Sequence length	100
%GC	51

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1710	0.3195312047447581	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	1017	0.19003697966398772	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	933	0.17434070995722767	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	911	0.17022978217688575	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	853	0.15939188166507523	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	689	0.12874678366616277	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	686	0.12818620260520705	No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG	679	0.1268781801296437	No Hit
GCTAAGAGCATCGAGGGGGCGCCGAGAGGCAAGGGGCGGGGACGGGCGGT	677	0.1265044594223399	No Hit
TTCTAGAGCTAATACATGCCGACGGGCGCTGACCCCCCTTCCCGGGGGGG	660	0.12332783341025752	No Hit
GCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAGTACGCACGGC	630	0.11772202280070035	No Hit
CTCTAGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCGGCGACGACCC	615	0.11491911749592178	No Hit
AGCTAATACATGCCGACGGGCGCTGACCCCCCTTCCCGGGGGGGGATGCG	609	0.11379795537401034	No Hit
CCAATGGATCCTCGTTAAAGGATTTAAAGTGGACTCATTCCAATTACAGG	607	0.11342423466670652	No Hit
GATTTAAAGTGGACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTAT	576	0.10763156370349747	No Hit
GTATCAACGCAGAGTACATGGGTACCTGGTTGATCCTGCCAGTAGCATAT	565	0.10557609981332651	No Hit
GATTAAGCCATGCATGTCTAAGTACGCACGGCCGGTACAGTGAAACTGCG	539	0.10071773061837697	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	1240	0.0	42.83997	1
GTACGGT	55	5.2725194E-5	42.736576	1
GTACATG	2940	0.0	37.896008	1
TACATGG	2950	0.0	37.448826	2
AACGCAG	1450	0.0	37.273525	6
TCAACGC	1470	0.0	36.446697	4
ACATGGG	3030	0.0	35.82944	3
ATCAACG	1485	0.0	35.76207	3
CAACGCA	1535	0.0	34.90335	5
TACGGTG	55	0.0027128193	34.18926	2
GGTACCT	670	0.0	30.863739	8
TGGGTAC	715	0.0	29.578568	6
GGGTACC	705	0.0	29.3315	7
CATGGGG	1700	0.0	29.304047	4
ACGCAGA	1860	0.0	28.80465	7
CGCAGAG	1860	0.0	28.551975	8
ATGGGTA	675	0.0	28.546362	5
TATCAAC	1960	0.0	27.10284	2
ATGGGGG	635	0.0	25.163778	5
GCAGAGT	2205	0.0	24.084658	9